Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.11■□□□□ 0.65
TOP1P11387 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TOP1P11387 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.1■□□□□ 0.65
TOP1P11387 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.1■□□□□ 0.65
TOP1P11387 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.1■□□□□ 0.65
TOP1P11387 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TOP1P11387 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 MIR943-201ENST00000401286 94 ntBASIC19.1■□□□□ 0.65
TOP1P11387 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.1■□□□□ 0.65
TOP1P11387 AL353705.2-201ENST00000428243 662 ntBASIC19.1■□□□□ 0.65
TOP1P11387 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TOP1P11387 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.1■□□□□ 0.65
TOP1P11387 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TOP1P11387 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.1■□□□□ 0.65
TOP1P11387 AC061975.2-201ENST00000581722 295 ntBASIC19.1■□□□□ 0.65
TOP1P11387 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.1■□□□□ 0.65
TOP1P11387 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 AL390955.2-201ENST00000603032 514 ntBASIC19.1■□□□□ 0.65
TOP1P11387 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.1■□□□□ 0.65
TOP1P11387 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.1■□□□□ 0.65
TOP1P11387 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.1■□□□□ 0.65
TOP1P11387 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TOP1P11387 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.1■□□□□ 0.65
TOP1P11387 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.1■□□□□ 0.65
TOP1P11387 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TOP1P11387 U82695.1-201ENST00000635752 1889 ntBASIC19.09■□□□□ 0.65
TOP1P11387 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
TOP1P11387 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.09■□□□□ 0.65
TOP1P11387 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.09■□□□□ 0.65
TOP1P11387 AC055876.3-201ENST00000431496 288 ntBASIC19.09■□□□□ 0.65
TOP1P11387 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.09■□□□□ 0.65
TOP1P11387 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.09■□□□□ 0.65
TOP1P11387 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.09■□□□□ 0.65
TOP1P11387 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 AC138649.4-201ENST00000612222 287 ntBASIC19.09■□□□□ 0.65
TOP1P11387 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 LINC02199-201ENST00000506655 2702 ntBASIC19.09■□□□□ 0.65
TOP1P11387 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TOP1P11387 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TOP1P11387 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
TOP1P11387 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.09■□□□□ 0.65
TOP1P11387 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TOP1P11387 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TOP1P11387 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.08■□□□□ 0.65
TOP1P11387 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TOP1P11387 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.08■□□□□ 0.65
TOP1P11387 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TOP1P11387 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TOP1P11387 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TOP1P11387 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TOP1P11387 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TOP1P11387 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.08■□□□□ 0.65
TOP1P11387 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
TOP1P11387 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TOP1P11387 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms