Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 KRT8P12-202ENST00000472924 1397 ntBASIC15.35■□□□□ 0.05
CTSBP07858 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.35■□□□□ 0.05
CTSBP07858 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSBP07858 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSBP07858 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CTSBP07858 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSBP07858 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSBP07858 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CTSBP07858 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CTSBP07858 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CTSBP07858 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 HIST3H2BA-201ENST00000436555 524 ntBASIC15.34■□□□□ 0.05
CTSBP07858 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.34■□□□□ 0.05
CTSBP07858 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.34■□□□□ 0.05
CTSBP07858 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSBP07858 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSBP07858 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSBP07858 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CTSBP07858 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.34■□□□□ 0.05
CTSBP07858 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.34■□□□□ 0.05
CTSBP07858 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.34■□□□□ 0.05
CTSBP07858 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.34■□□□□ 0.05
CTSBP07858 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSBP07858 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.34■□□□□ 0.05
CTSBP07858 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSBP07858 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 AL691432.1-201ENST00000596308 1422 ntBASIC15.34■□□□□ 0.05
CTSBP07858 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSBP07858 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CTSBP07858 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTSBP07858 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTSBP07858 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.33■□□□□ 0.05
CTSBP07858 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CTSBP07858 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTSBP07858 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CTSBP07858 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTSBP07858 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTSBP07858 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.33■□□□□ 0.04
CTSBP07858 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.33■□□□□ 0.04
CTSBP07858 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 AC006449.5-201ENST00000610658 2098 ntBASIC15.33■□□□□ 0.04
CTSBP07858 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.33■□□□□ 0.04
CTSBP07858 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CTSBP07858 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.33■□□□□ 0.04
CTSBP07858 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.33■□□□□ 0.04
CTSBP07858 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.33■□□□□ 0.04
CTSBP07858 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.33■□□□□ 0.04
CTSBP07858 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 AC026979.3-201ENST00000607315 403 ntBASIC15.33■□□□□ 0.04
CTSBP07858 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.33■□□□□ 0.04
CTSBP07858 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.33■□□□□ 0.04
CTSBP07858 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
CTSBP07858 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSBP07858 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CTSBP07858 AC134407.2-201ENST00000625089 1978 ntBASIC15.33■□□□□ 0.04
CTSBP07858 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.32■□□□□ 0.04
CTSBP07858 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CTSBP07858 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSBP07858 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms