Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.85□□□□□ -0.35
TRGV3P03979 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
TRGV3P03979 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.85□□□□□ -0.35
TRGV3P03979 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
TRGV3P03979 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.85□□□□□ -0.35
TRGV3P03979 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 AC005622.1-201ENST00000636801 1703 ntBASIC12.85□□□□□ -0.35
TRGV3P03979 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
TRGV3P03979 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRGV3P03979 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.85□□□□□ -0.35
TRGV3P03979 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRGV3P03979 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
TRGV3P03979 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV3P03979 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV3P03979 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.84□□□□□ -0.35
TRGV3P03979 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
TRGV3P03979 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 YBX1P5-201ENST00000509441 847 ntBASIC12.84□□□□□ -0.35
TRGV3P03979 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.84□□□□□ -0.35
TRGV3P03979 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.84□□□□□ -0.35
TRGV3P03979 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV3P03979 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV3P03979 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.84□□□□□ -0.35
TRGV3P03979 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV3P03979 AC027307.2-201ENST00000591252 911 ntBASIC12.84□□□□□ -0.35
TRGV3P03979 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.84□□□□□ -0.35
TRGV3P03979 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.84□□□□□ -0.35
TRGV3P03979 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 AL662844.4-201ENST00000606367 2838 ntBASIC12.84□□□□□ -0.35
TRGV3P03979 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRGV3P03979 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TRGV3P03979 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
TRGV3P03979 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRGV3P03979 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.83□□□□□ -0.35
TRGV3P03979 LINC02199-201ENST00000506655 2702 ntBASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms