Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AP002414.1-201ENST00000391405 1147 ntBASIC13.69□□□□□ -0.22
SIX6O95475 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.69□□□□□ -0.22
SIX6O95475 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.69□□□□□ -0.22
SIX6O95475 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.69□□□□□ -0.22
SIX6O95475 AP001412.1-201ENST00000608405 714 ntBASIC13.69□□□□□ -0.22
SIX6O95475 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.69□□□□□ -0.22
SIX6O95475 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SIX6O95475 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SIX6O95475 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 AC125634.1-201ENST00000438758 1403 ntBASIC13.68□□□□□ -0.22
SIX6O95475 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 FAM220CP-201ENST00000395253 831 ntBASIC13.68□□□□□ -0.22
SIX6O95475 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.68□□□□□ -0.22
SIX6O95475 AC128688.1-201ENST00000487626 519 ntBASIC13.68□□□□□ -0.22
SIX6O95475 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.68□□□□□ -0.22
SIX6O95475 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 ZNF444P1-201ENST00000559497 298 ntBASIC13.68□□□□□ -0.22
SIX6O95475 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.68□□□□□ -0.22
SIX6O95475 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.68□□□□□ -0.22
SIX6O95475 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SIX6O95475 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SIX6O95475 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.68□□□□□ -0.22
SIX6O95475 CICP20-201ENST00000443330 2801 ntBASIC13.68□□□□□ -0.22
SIX6O95475 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms