Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
VAPBO95292 AC074386.1-202ENST00000463561 864 ntBASIC16.4■□□□□ 0.22
VAPBO95292 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.4■□□□□ 0.22
VAPBO95292 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.4■□□□□ 0.22
VAPBO95292 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.4■□□□□ 0.22
VAPBO95292 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
VAPBO95292 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.4■□□□□ 0.22
VAPBO95292 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.4■□□□□ 0.22
VAPBO95292 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
VAPBO95292 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.4■□□□□ 0.22
VAPBO95292 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VAPBO95292 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
VAPBO95292 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.39■□□□□ 0.22
VAPBO95292 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.39■□□□□ 0.22
VAPBO95292 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.39■□□□□ 0.22
VAPBO95292 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.39■□□□□ 0.21
VAPBO95292 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VAPBO95292 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
VAPBO95292 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.39■□□□□ 0.21
VAPBO95292 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 MIR648-201ENST00000385046 94 ntBASIC16.39■□□□□ 0.21
VAPBO95292 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.39■□□□□ 0.21
VAPBO95292 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.39■□□□□ 0.21
VAPBO95292 RNA5SP416-201ENST00000516838 111 ntBASIC16.39■□□□□ 0.21
VAPBO95292 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VAPBO95292 PDPK2P-202ENST00000562415 1191 ntBASIC16.39■□□□□ 0.21
VAPBO95292 AC106730.1-201ENST00000566722 1090 ntBASIC16.39■□□□□ 0.21
VAPBO95292 AC068137.2-201ENST00000605408 478 ntBASIC16.39■□□□□ 0.21
VAPBO95292 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.39■□□□□ 0.21
VAPBO95292 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
VAPBO95292 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VAPBO95292 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VAPBO95292 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.38■□□□□ 0.21
VAPBO95292 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.38■□□□□ 0.21
VAPBO95292 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.38■□□□□ 0.21
VAPBO95292 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.38■□□□□ 0.21
VAPBO95292 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.38■□□□□ 0.21
VAPBO95292 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 PRAL-201ENST00000624952 3286 ntBASIC16.38■□□□□ 0.21
VAPBO95292 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.38■□□□□ 0.21
VAPBO95292 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.38■□□□□ 0.21
VAPBO95292 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.38■□□□□ 0.21
VAPBO95292 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VAPBO95292 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 AC026396.1-201ENST00000419388 421 ntBASIC16.38■□□□□ 0.21
VAPBO95292 MED15P5-201ENST00000423150 992 ntBASIC16.38■□□□□ 0.21
VAPBO95292 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.38■□□□□ 0.21
VAPBO95292 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
VAPBO95292 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.38■□□□□ 0.21
VAPBO95292 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.38■□□□□ 0.21
VAPBO95292 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.38■□□□□ 0.21
VAPBO95292 AC140113.2-201ENST00000604370 208 ntBASIC16.38■□□□□ 0.21
VAPBO95292 AC027601.4-201ENST00000611259 610 ntBASIC16.38■□□□□ 0.21
VAPBO95292 AC092865.6-201ENST00000642101 219 ntBASIC16.38■□□□□ 0.21
VAPBO95292 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.38■□□□□ 0.21
VAPBO95292 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VAPBO95292 AC073439.1-201ENST00000624121 1774 ntBASIC16.38■□□□□ 0.21
VAPBO95292 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.38■□□□□ 0.21
VAPBO95292 AC112504.1-201ENST00000623415 1841 ntBASIC16.38■□□□□ 0.21
VAPBO95292 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
VAPBO95292 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VAPBO95292 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.38■□□□□ 0.21
VAPBO95292 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VAPBO95292 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VAPBO95292 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.37■□□□□ 0.21
VAPBO95292 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VAPBO95292 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.37■□□□□ 0.21
VAPBO95292 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VAPBO95292 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms