Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST1O76090 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.01■□□□□ 0.31
BEST1O76090 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BEST1O76090 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST1O76090 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17■□□□□ 0.31
BEST1O76090 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17■□□□□ 0.31
BEST1O76090 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17■□□□□ 0.31
BEST1O76090 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17■□□□□ 0.31
BEST1O76090 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17■□□□□ 0.31
BEST1O76090 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17■□□□□ 0.31
BEST1O76090 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BEST1O76090 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17■□□□□ 0.31
BEST1O76090 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
BEST1O76090 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
BEST1O76090 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BEST1O76090 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
BEST1O76090 SPDYE17-201ENST00000412399 783 ntBASIC17■□□□□ 0.31
BEST1O76090 MRPS18AP1-201ENST00000414458 589 ntBASIC17■□□□□ 0.31
BEST1O76090 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17■□□□□ 0.31
BEST1O76090 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17■□□□□ 0.31
BEST1O76090 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 AC245100.5-201ENST00000452108 331 ntBASIC17■□□□□ 0.31
BEST1O76090 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17■□□□□ 0.31
BEST1O76090 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17■□□□□ 0.31
BEST1O76090 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 AC011467.4-201ENST00000594891 528 ntBASIC17■□□□□ 0.31
BEST1O76090 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
BEST1O76090 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
BEST1O76090 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17■□□□□ 0.31
BEST1O76090 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17■□□□□ 0.31
BEST1O76090 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17■□□□□ 0.31
BEST1O76090 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BEST1O76090 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17■□□□□ 0.31
BEST1O76090 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
BEST1O76090 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 AC134407.2-201ENST00000625089 1978 ntBASIC16.99■□□□□ 0.31
BEST1O76090 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.99■□□□□ 0.31
BEST1O76090 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.99■□□□□ 0.31
BEST1O76090 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.99■□□□□ 0.31
BEST1O76090 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.99■□□□□ 0.31
BEST1O76090 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 AL844908.2-201ENST00000609461 460 ntBASIC16.99■□□□□ 0.31
BEST1O76090 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.99■□□□□ 0.31
BEST1O76090 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms