Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.57■□□□□ 0.08
LCMT2O60294 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LCMT2O60294 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.57■□□□□ 0.08
LCMT2O60294 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 PCDHA1-201ENST00000378133 2726 ntBASIC15.57■□□□□ 0.08
LCMT2O60294 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.57■□□□□ 0.08
LCMT2O60294 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LCMT2O60294 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.57■□□□□ 0.08
LCMT2O60294 AC008894.3-201ENST00000624324 3103 ntBASIC15.57■□□□□ 0.08
LCMT2O60294 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LCMT2O60294 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 AC018695.7-201ENST00000624587 2492 ntBASIC15.56■□□□□ 0.08
LCMT2O60294 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LCMT2O60294 HLA-H-201ENST00000383620 1096 ntBASIC15.56■□□□□ 0.08
LCMT2O60294 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.56■□□□□ 0.08
LCMT2O60294 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.56■□□□□ 0.08
LCMT2O60294 SPDYE14P-201ENST00000442619 822 ntBASIC15.56■□□□□ 0.08
LCMT2O60294 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.56■□□□□ 0.08
LCMT2O60294 HLA-J-203ENST00000494367 1087 ntBASIC15.56■□□□□ 0.08
LCMT2O60294 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.56■□□□□ 0.08
LCMT2O60294 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.56■□□□□ 0.08
LCMT2O60294 AC109322.1-201ENST00000524499 1264 ntBASIC15.56■□□□□ 0.08
LCMT2O60294 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.56■□□□□ 0.08
LCMT2O60294 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.56■□□□□ 0.08
LCMT2O60294 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 AC026150.2-201ENST00000564693 1156 ntBASIC15.56■□□□□ 0.08
LCMT2O60294 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.56■□□□□ 0.08
LCMT2O60294 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LCMT2O60294 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.56■□□□□ 0.08
LCMT2O60294 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LCMT2O60294 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LCMT2O60294 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCMT2O60294 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.55■□□□□ 0.08
LCMT2O60294 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LCMT2O60294 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.55■□□□□ 0.08
LCMT2O60294 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
LCMT2O60294 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LCMT2O60294 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.55■□□□□ 0.08
LCMT2O60294 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.55■□□□□ 0.08
LCMT2O60294 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.55■□□□□ 0.08
LCMT2O60294 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.55■□□□□ 0.08
LCMT2O60294 AC024267.1-201ENST00000582320 895 ntBASIC15.55■□□□□ 0.08
LCMT2O60294 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.55■□□□□ 0.08
LCMT2O60294 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.55■□□□□ 0.08
LCMT2O60294 LINC00628-201ENST00000628516 1289 ntBASIC15.55■□□□□ 0.08
LCMT2O60294 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms