Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 AC126335.2-201ENST00000623362 4637 ntBASIC12.26□□□□□ -0.45
SNAI2O43623 SNX33P1-201ENST00000592116 1762 ntBASIC12.26□□□□□ -0.45
SNAI2O43623 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SNAI2O43623 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SNAI2O43623 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 AC063952.2-201ENST00000498792 1227 ntBASIC12.26□□□□□ -0.45
SNAI2O43623 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.26□□□□□ -0.45
SNAI2O43623 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.26□□□□□ -0.45
SNAI2O43623 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.26□□□□□ -0.45
SNAI2O43623 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
SNAI2O43623 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 AP005901.3-202ENST00000581653 237 ntBASIC12.26□□□□□ -0.45
SNAI2O43623 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.26□□□□□ -0.45
SNAI2O43623 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.26□□□□□ -0.45
SNAI2O43623 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
SNAI2O43623 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 AC026748.1-201ENST00000624349 3251 ntBASIC12.26□□□□□ -0.45
SNAI2O43623 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SNAI2O43623 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SNAI2O43623 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.26□□□□□ -0.45
SNAI2O43623 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.25□□□□□ -0.45
SNAI2O43623 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.25□□□□□ -0.45
SNAI2O43623 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SNAI2O43623 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SNAI2O43623 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.25□□□□□ -0.45
SNAI2O43623 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SNAI2O43623 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.25□□□□□ -0.45
SNAI2O43623 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SNAI2O43623 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.25□□□□□ -0.45
SNAI2O43623 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.25□□□□□ -0.45
SNAI2O43623 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.25□□□□□ -0.45
SNAI2O43623 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.25□□□□□ -0.45
SNAI2O43623 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.25□□□□□ -0.45
SNAI2O43623 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.25□□□□□ -0.45
SNAI2O43623 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.25□□□□□ -0.45
SNAI2O43623 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.25□□□□□ -0.45
SNAI2O43623 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.25□□□□□ -0.45
SNAI2O43623 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SNAI2O43623 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.25□□□□□ -0.45
SNAI2O43623 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 TOP3BP1-201ENST00000420768 1380 ntBASIC12.25□□□□□ -0.45
SNAI2O43623 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SNAI2O43623 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms