Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RNF13O43567 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RNF13O43567 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF13O43567 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RNF13O43567 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF13O43567 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF13O43567 HMGA1P7-201ENST00000406908 502 ntBASIC14.88□□□□□ -0.03
RNF13O43567 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RNF13O43567 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF13O43567 POU5F1P6-201ENST00000466990 990 ntBASIC14.88□□□□□ -0.03
RNF13O43567 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF13O43567 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF13O43567 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF13O43567 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF13O43567 Z83851.2-201ENST00000609564 659 ntBASIC14.88□□□□□ -0.03
RNF13O43567 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF13O43567 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF13O43567 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.88□□□□□ -0.03
RNF13O43567 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.88□□□□□ -0.03
RNF13O43567 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF13O43567 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RNF13O43567 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF13O43567 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF13O43567 AC126755.1-201ENST00000525846 6405 ntBASIC14.88□□□□□ -0.03
RNF13O43567 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF13O43567 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF13O43567 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RNF13O43567 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RNF13O43567 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 RNU1-129P-201ENST00000384064 167 ntBASIC14.87□□□□□ -0.03
RNF13O43567 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 IGLL3P-201ENST00000412472 434 ntBASIC14.87□□□□□ -0.03
RNF13O43567 HCG4B-203ENST00000450128 991 ntBASIC14.87□□□□□ -0.03
RNF13O43567 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF13O43567 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF13O43567 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 U1.21-201ENST00000580816 167 ntBASIC14.87□□□□□ -0.03
RNF13O43567 AL031055.1-201ENST00000606362 631 ntBASIC14.87□□□□□ -0.03
RNF13O43567 AC021097.1-201ENST00000607902 574 ntBASIC14.87□□□□□ -0.03
RNF13O43567 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF13O43567 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.87□□□□□ -0.03
RNF13O43567 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF13O43567 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
RNF13O43567 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF13O43567 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms