Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PHF1O43189 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PHF1O43189 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PHF1O43189 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
PHF1O43189 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.15□□□□□ -0.14
PHF1O43189 CXCL1P1-201ENST00000502804 216 ntBASIC14.15□□□□□ -0.14
PHF1O43189 AP002490.2-201ENST00000524791 560 ntBASIC14.15□□□□□ -0.14
PHF1O43189 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.15□□□□□ -0.14
PHF1O43189 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.15□□□□□ -0.14
PHF1O43189 AC096734.2-201ENST00000562054 433 ntBASIC14.15□□□□□ -0.14
PHF1O43189 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.15□□□□□ -0.14
PHF1O43189 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PHF1O43189 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.15□□□□□ -0.14
PHF1O43189 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PHF1O43189 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PHF1O43189 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
PHF1O43189 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.15□□□□□ -0.14
PHF1O43189 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PHF1O43189 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PHF1O43189 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.14□□□□□ -0.15
PHF1O43189 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
PHF1O43189 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.14□□□□□ -0.15
PHF1O43189 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.14□□□□□ -0.15
PHF1O43189 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.14□□□□□ -0.15
PHF1O43189 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PHF1O43189 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.14□□□□□ -0.15
PHF1O43189 AC007274.1-201ENST00000439805 662 ntBASIC14.14□□□□□ -0.15
PHF1O43189 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 AC093214.1-201ENST00000511688 1107 ntBASIC14.14□□□□□ -0.15
PHF1O43189 AC005225.4-201ENST00000557330 545 ntBASIC14.14□□□□□ -0.15
PHF1O43189 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PHF1O43189 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.14□□□□□ -0.15
PHF1O43189 AL513210.1-201ENST00000629608 234 ntBASIC14.14□□□□□ -0.15
PHF1O43189 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PHF1O43189 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PHF1O43189 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 AC025580.3-201ENST00000617932 1424 ntBASIC14.14□□□□□ -0.15
PHF1O43189 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PHF1O43189 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PHF1O43189 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.13□□□□□ -0.15
PHF1O43189 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.13□□□□□ -0.15
PHF1O43189 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PHF1O43189 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 AL391256.1-201ENST00000443260 1855 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms