Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.8□□□□□ -0.68
RTL8CO15255 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC10.8□□□□□ -0.68
RTL8CO15255 MFF-223ENST00000524634 647 ntTSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 RRP7BP-205ENST00000566851 833 ntBASIC10.8□□□□□ -0.68
RTL8CO15255 AC092337.1-201ENST00000568699 1129 ntBASIC10.8□□□□□ -0.68
RTL8CO15255 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 MIR8072-201ENST00000614241 80 ntBASIC10.8□□□□□ -0.68
RTL8CO15255 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC10.8□□□□□ -0.68
RTL8CO15255 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTL8CO15255 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC10.8□□□□□ -0.68
RTL8CO15255 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC10.8□□□□□ -0.68
RTL8CO15255 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 LTB4R2-202ENST00000528054 3092 ntBASIC10.79□□□□□ -0.68
RTL8CO15255 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC10.79□□□□□ -0.68
RTL8CO15255 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC10.79□□□□□ -0.68
RTL8CO15255 AC092068.3-201ENST00000587894 2016 ntBASIC10.79□□□□□ -0.68
RTL8CO15255 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 CDC14C-201ENST00000428251 1719 ntBASIC10.79□□□□□ -0.68
RTL8CO15255 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RTL8CO15255 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.79□□□□□ -0.68
RTL8CO15255 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
RTL8CO15255 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
RTL8CO15255 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC10.79□□□□□ -0.68
RTL8CO15255 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC10.79□□□□□ -0.68
RTL8CO15255 ACTBP11-201ENST00000436287 1126 ntBASIC10.79□□□□□ -0.68
RTL8CO15255 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC10.79□□□□□ -0.68
RTL8CO15255 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC10.79□□□□□ -0.68
RTL8CO15255 AP002490.2-201ENST00000524791 560 ntBASIC10.79□□□□□ -0.68
RTL8CO15255 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC10.79□□□□□ -0.68
RTL8CO15255 USB1-203ENST00000539737 1212 ntTSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC10.79□□□□□ -0.68
RTL8CO15255 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC10.79□□□□□ -0.68
RTL8CO15255 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.79□□□□□ -0.68
RTL8CO15255 GPR182-203ENST00000622922 591 ntBASIC10.79□□□□□ -0.68
RTL8CO15255 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
RTL8CO15255 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
RTL8CO15255 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.79□□□□□ -0.68
RTL8CO15255 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC10.79□□□□□ -0.68
RTL8CO15255 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RTL8CO15255 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms