Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN5O00501 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN5O00501 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN5O00501 AL079307.3-201ENST00000556114 283 ntBASIC17.12■□□□□ 0.33
CLDN5O00501 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN5O00501 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN5O00501 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN5O00501 AL590560.3-201ENST00000623350 461 ntBASIC17.12■□□□□ 0.33
CLDN5O00501 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CLDN5O00501 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.12■□□□□ 0.33
CLDN5O00501 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 AC006449.5-201ENST00000610658 2098 ntBASIC17.12■□□□□ 0.33
CLDN5O00501 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN5O00501 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN5O00501 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN5O00501 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN5O00501 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN5O00501 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN5O00501 AL118508.1-201ENST00000613502 2345 ntBASIC17.12■□□□□ 0.33
CLDN5O00501 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN5O00501 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN5O00501 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN5O00501 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN5O00501 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CLDN5O00501 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN5O00501 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN5O00501 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN5O00501 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN5O00501 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN5O00501 BASP1P1-201ENST00000430708 665 ntBASIC17.11■□□□□ 0.33
CLDN5O00501 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CLDN5O00501 UGT1A2P-201ENST00000454886 866 ntBASIC17.11■□□□□ 0.33
CLDN5O00501 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN5O00501 HLA-V-204ENST00000476601 1289 ntBASIC17.11■□□□□ 0.33
CLDN5O00501 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN5O00501 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN5O00501 TEX28P1-201ENST00000613479 1221 ntBASIC17.11■□□□□ 0.33
CLDN5O00501 TEX28P2-201ENST00000617764 1221 ntBASIC17.11■□□□□ 0.33
CLDN5O00501 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN5O00501 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN5O00501 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN5O00501 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN5O00501 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN5O00501 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN5O00501 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN5O00501 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN5O00501 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN5O00501 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN5O00501 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN5O00501 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 AC241585.1-201ENST00000433527 519 ntBASIC17.1■□□□□ 0.33
CLDN5O00501 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 AL139010.1-201ENST00000454878 894 ntBASIC17.1■□□□□ 0.33
CLDN5O00501 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN5O00501 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN5O00501 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CLDN5O00501 AL096865.1-201ENST00000606796 927 ntBASIC17.1■□□□□ 0.33
CLDN5O00501 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN5O00501 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN5O00501 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN5O00501 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms