Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC188H7C350 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC188H7C350 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC188H7C350 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC188H7C350 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 FOSL1P1-201ENST00000511041 816 ntBASIC16.95■□□□□ 0.3
CCDC188H7C350 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC188H7C350 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC188H7C350 MIR3909-201ENST00000579518 119 ntBASIC16.95■□□□□ 0.3
CCDC188H7C350 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC188H7C350 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC188H7C350 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC188H7C350 AC025062.2-201ENST00000605477 670 ntBASIC16.95■□□□□ 0.3
CCDC188H7C350 AC008608.2-201ENST00000606089 416 ntBASIC16.95■□□□□ 0.3
CCDC188H7C350 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC188H7C350 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC188H7C350 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.94■□□□□ 0.3
CCDC188H7C350 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC188H7C350 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC188H7C350 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 AC138035.3-201ENST00000622706 2791 ntBASIC16.94■□□□□ 0.3
CCDC188H7C350 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CCDC188H7C350 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 AC091076.1-201ENST00000610741 619 ntBASIC16.94■□□□□ 0.3
CCDC188H7C350 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC188H7C350 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC188H7C350 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC188H7C350 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC188H7C350 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 PKD1P5-201ENST00000532415 10291 ntBASIC16.94■□□□□ 0.3
CCDC188H7C350 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC188H7C350 LINC02228-204ENST00000642115 2962 ntBASIC16.94■□□□□ 0.3
CCDC188H7C350 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC188H7C350 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 AL136379.1-201ENST00000623471 2642 ntBASIC16.94■□□□□ 0.3
CCDC188H7C350 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC188H7C350 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC188H7C350 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC188H7C350 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC188H7C350 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CCDC188H7C350 CICP13-201ENST00000422015 2789 ntBASIC16.93■□□□□ 0.3
CCDC188H7C350 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC188H7C350 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC188H7C350 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC188H7C350 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC188H7C350 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms