Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 AC232323.1-201ENST00000540724 2099 ntBASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 REXO1L5P-201ENST00000622260 2098 ntBASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 REXO1L1P-202ENST00000608646 1974 ntBASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 MECR-202ENST00000373791 2416 ntTSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 KRT8P9-201ENST00000558927 1449 ntBASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 HES2-206ENST00000489730 730 ntTSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 DUTP2-201ENST00000519164 463 ntBASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 AC034236.2-201ENST00000606662 1610 ntBASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 BLK-205ENST00000529894 2017 ntTSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CHKB-CPT1BH3BT56 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 RASA4CP-201ENST00000424092 1398 ntBASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
CHKB-CPT1BH3BT56 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms