Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 AC244107.1-201ENST00000442033 332 ntBASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 GNAQP1-201ENST00000444815 1067 ntBASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 GAPDHP21-201ENST00000450301 1010 ntBASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 MIR6069-201ENST00000620069 79 ntBASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TBC1D3FA6NER0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 SPDYE17-201ENST00000412399 783 ntBASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 AL353779.1-201ENST00000434793 351 ntBASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 RN7SL692P-201ENST00000464677 288 ntBASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 ZNF890P-202ENST00000530367 1156 ntBASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 AL596325.1-201ENST00000563991 1082 ntBASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TBC1D3FA6NER0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 AC104794.3-201ENST00000566840 1248 ntBASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 MIR4321-201ENST00000592276 80 ntBASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms