Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC105250.1-201ENST00000509378 2057 ntBASIC17.32■□□□□ 0.36
RCCD1A6NED2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RCCD1A6NED2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 AC090616.6-203ENST00000579186 1945 ntBASIC17.31■□□□□ 0.36
RCCD1A6NED2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 CICP24-201ENST00000605464 2705 ntBASIC17.31■□□□□ 0.36
RCCD1A6NED2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 AC092127.1-201ENST00000567093 3455 ntBASIC17.31■□□□□ 0.36
RCCD1A6NED2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 CXCL1P1-201ENST00000502804 216 ntBASIC17.31■□□□□ 0.36
RCCD1A6NED2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 MIR3909-201ENST00000579518 119 ntBASIC17.31■□□□□ 0.36
RCCD1A6NED2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 MIR1199-201ENST00000621445 119 ntBASIC17.31■□□□□ 0.36
RCCD1A6NED2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RCCD1A6NED2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
RCCD1A6NED2 AC091951.1-201ENST00000512854 2465 ntBASIC17.3■□□□□ 0.36
RCCD1A6NED2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 PMS2P4-201ENST00000412466 1052 ntBASIC17.3■□□□□ 0.36
RCCD1A6NED2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 AC073648.2-201ENST00000510116 352 ntBASIC17.3■□□□□ 0.36
RCCD1A6NED2 MTND2P7-201ENST00000521337 640 ntBASIC17.3■□□□□ 0.36
RCCD1A6NED2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 AKR1B10P2-201ENST00000577332 927 ntBASIC17.3■□□□□ 0.36
RCCD1A6NED2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 AC117500.6-201ENST00000624871 588 ntBASIC17.3■□□□□ 0.36
RCCD1A6NED2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RCCD1A6NED2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RCCD1A6NED2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 AC099063.4-201ENST00000641099 1602 ntBASIC17.29■□□□□ 0.36
RCCD1A6NED2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RCCD1A6NED2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RCCD1A6NED2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms