Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 LINC00265-3P-201ENST00000447588 903 ntBASIC14.21□□□□□ -0.13
SHISA3A0PJX4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 AC005912.2-201ENST00000619492 2400 ntBASIC14.21□□□□□ -0.14
SHISA3A0PJX4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHISA3A0PJX4 U82695.1-201ENST00000635752 1889 ntBASIC14.21□□□□□ -0.14
SHISA3A0PJX4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.2□□□□□ -0.14
SHISA3A0PJX4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 AGAP7P-201ENST00000582299 2062 ntBASIC14.2□□□□□ -0.14
SHISA3A0PJX4 AGAP14-201ENST00000624701 2060 ntBASIC14.2□□□□□ -0.14
SHISA3A0PJX4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 AL589182.2-201ENST00000619332 1049 ntBASIC14.2□□□□□ -0.14
SHISA3A0PJX4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 AC007686.3-201ENST00000619017 3487 ntBASIC14.2□□□□□ -0.14
SHISA3A0PJX4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SHISA3A0PJX4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 AL390755.1-201ENST00000623716 2027 ntBASIC14.19□□□□□ -0.14
SHISA3A0PJX4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHISA3A0PJX4 DUX4L26-201ENST00000489078 1255 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms