Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 PGM5P2-202ENST00000637225 1043 ntBASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 LINC01101-201ENST00000622953 1884 ntBASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC005622.1-201ENST00000636801 1703 ntBASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 SNX18-202ENST00000343017 3140 ntBASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 RPS2P1-201ENST00000434010 821 ntBASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 MIR1199-201ENST00000621445 119 ntBASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV6-7A0A0A0MS04 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
TRBV6-7A0A0A0MS04 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC073648.2-201ENST00000510116 352 ntBASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 AC008735.5-201ENST00000623544 497 ntBASIC13.64□□□□□ -0.23
TRBV6-7A0A0A0MS04 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms