Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 AC025580.3-201ENST00000617932 1424 ntBASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX49Q9Y6V7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 AP002414.1-201ENST00000391405 1147 ntBASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 C20orf181-201ENST00000623918 480 ntBASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX49Q9Y6V7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DDX49Q9Y6V7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DDX49Q9Y6V7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DDX49Q9Y6V7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
DDX49Q9Y6V7 AP002414.2-201ENST00000591780 3365 ntBASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 METTL21AP1-201ENST00000438852 635 ntBASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 KRT18P28-201ENST00000453838 1332 ntBASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
DDX49Q9Y6V7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 AC092919.2-201ENST00000623631 1645 ntBASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 PDPK2P-202ENST00000562415 1191 ntBASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 AC010491.1-201ENST00000563101 2797 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms