Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TSSC4Q9Y5U2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AL645608.8-201ENST00000606034 2086 ntBASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AC092053.1-201ENST00000605787 1936 ntBASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 HLA-H-201ENST00000383620 1096 ntBASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AC003101.2-201ENST00000612557 442 ntBASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AL390754.1-201ENST00000619088 582 ntBASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TSSC4Q9Y5U2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 AP3S2-216ENST00000617003 1561 ntBASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.81□□□□□ -0.36
TSSC4Q9Y5U2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms