Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 BEND3P1-201ENST00000421591 1944 ntBASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 MROH4P-201ENST00000431302 1578 ntBASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 AC009090.5-201ENST00000624886 2285 ntBASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 AL353807.1-201ENST00000427475 662 ntBASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 KRT18P5-201ENST00000436075 1291 ntBASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 AC019129.2-201ENST00000609837 1235 ntBASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAPPC1Q9Y5R8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 AC006277.1-201ENST00000624348 1610 ntBASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 TSPY12P-201ENST00000421279 868 ntBASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAPPC1Q9Y5R8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms