Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 AC009477.1-201ENST00000452936 217 ntBASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 AC061975.2-201ENST00000581722 295 ntBASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 U82695.1-201ENST00000635752 1889 ntBASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTDP1Q9Y5B0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 AL080243.2-201ENST00000418783 582 ntBASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 AL139010.1-201ENST00000454878 894 ntBASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 AL844908.2-201ENST00000609461 460 ntBASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 AC008738.7-201ENST00000609744 511 ntBASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 AL662799.1-202ENST00000614205 422 ntBASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTDP1Q9Y5B0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 AC005332.8-201ENST00000622750 2735 ntBASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 AC009407.1-201ENST00000568958 598 ntBASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTDP1Q9Y5B0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTDP1Q9Y5B0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CTDP1Q9Y5B0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 AC244107.1-201ENST00000442033 332 ntBASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 SPTLC1P1-201ENST00000447199 261 ntBASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.76■□□□□ 0.59
CTDP1Q9Y5B0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms