Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRCH1Q9Y2L9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AC117489.1-201ENST00000625169 3217 ntBASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 PVRIG2P-201ENST00000435460 978 ntBASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AC034232.1-201ENST00000506026 1064 ntBASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AC109462.3-201ENST00000573934 613 ntBASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AC009090.5-201ENST00000624886 2285 ntBASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRCH1Q9Y2L9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AL135999.2-201ENST00000622438 1686 ntBASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AL021920.2-201ENST00000624828 1351 ntBASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 SEC1P-202ENST00000473944 940 ntBASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AC013467.2-201ENST00000605472 835 ntBASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AC091951.1-201ENST00000512854 2465 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms