Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.92■□□□□ 0.3
AP4E1Q9UPM8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP4E1Q9UPM8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.92■□□□□ 0.3
AP4E1Q9UPM8 AC008741.2-201ENST00000612792 3115 ntBASIC16.92■□□□□ 0.3
AP4E1Q9UPM8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 AC142381.1-201ENST00000426099 345 ntBASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 YBX1P5-201ENST00000509441 847 ntBASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 IGHV3-62-201ENST00000520057 340 ntBASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 SPTSSB-204ENST00000617024 1292 ntBASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP4E1Q9UPM8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 RPSAP43-201ENST00000402237 625 ntBASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 UPF3AP3-201ENST00000420996 769 ntBASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 AC112482.1-201ENST00000492080 688 ntBASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 AC098859.1-201ENST00000502915 1238 ntBASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 AC092865.5-201ENST00000545435 363 ntBASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 LINC01225-203ENST00000563550 1244 ntBASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 AP000842.3-202ENST00000569238 1080 ntBASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4E1Q9UPM8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
AP4E1Q9UPM8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
AP4E1Q9UPM8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
AP4E1Q9UPM8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
AP4E1Q9UPM8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
AP4E1Q9UPM8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
AP4E1Q9UPM8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
AP4E1Q9UPM8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 AL592309.1-201ENST00000443127 649 ntBASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.89■□□□□ 0.29
AP4E1Q9UPM8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms