Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD1Q9UIS9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 AC114501.2-201ENST00000439631 535 ntBASIC16.32■□□□□ 0.2
MBD1Q9UIS9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 AC093004.1-201ENST00000508850 424 ntBASIC16.32■□□□□ 0.2
MBD1Q9UIS9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
MBD1Q9UIS9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 PCDHB19P-201ENST00000570871 2371 ntBASIC16.31■□□□□ 0.2
MBD1Q9UIS9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AC093724.1-201ENST00000448659 1027 ntBASIC16.31■□□□□ 0.2
MBD1Q9UIS9 ACA64.2-201ENST00000459014 129 ntBASIC16.31■□□□□ 0.2
MBD1Q9UIS9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AL162274.1-201ENST00000617191 1098 ntBASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AC007431.3-201ENST00000623221 587 ntBASIC16.31■□□□□ 0.2
MBD1Q9UIS9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD1Q9UIS9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 SLC7A15P-201ENST00000424028 1363 ntBASIC16.3■□□□□ 0.2
MBD1Q9UIS9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 ME2P1-201ENST00000426028 1970 ntBASIC16.3■□□□□ 0.2
MBD1Q9UIS9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD1Q9UIS9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms