Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSU72Q9NP77 AC093724.1-201ENST00000448659 1027 ntBASIC16.18■□□□□ 0.18
SSU72Q9NP77 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSU72Q9NP77 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSU72Q9NP77 AC006557.2-201ENST00000592985 1240 ntBASIC16.18■□□□□ 0.18
SSU72Q9NP77 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSU72Q9NP77 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSU72Q9NP77 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSU72Q9NP77 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.18■□□□□ 0.18
SSU72Q9NP77 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSU72Q9NP77 AL009178.2-201ENST00000597278 2719 ntBASIC16.18■□□□□ 0.18
SSU72Q9NP77 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 IER3-202ENST00000376377 1350 ntBASIC16.17■□□□□ 0.18
SSU72Q9NP77 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.17■□□□□ 0.18
SSU72Q9NP77 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 RNU1-129P-201ENST00000384064 167 ntBASIC16.17■□□□□ 0.18
SSU72Q9NP77 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 RPS15P9-201ENST00000494093 319 ntBASIC16.17■□□□□ 0.18
SSU72Q9NP77 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 SART3-203ENST00000546611 1184 ntBASIC16.17■□□□□ 0.18
SSU72Q9NP77 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 U1.21-201ENST00000580816 167 ntBASIC16.17■□□□□ 0.18
SSU72Q9NP77 AC069148.1-201ENST00000608741 768 ntBASIC16.17■□□□□ 0.18
SSU72Q9NP77 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSU72Q9NP77 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.17■□□□□ 0.18
SSU72Q9NP77 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 AP001282.1-201ENST00000531301 1499 ntBASIC16.16■□□□□ 0.18
SSU72Q9NP77 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SSU72Q9NP77 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSU72Q9NP77 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SSU72Q9NP77 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms