Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 MED15P5-201ENST00000423150 992 ntBASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 AC140658.5-201ENST00000438532 169 ntBASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 AL591424.1-201ENST00000442569 1213 ntBASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 MIR3687-2-201ENST00000577708 61 ntBASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 AL078644.1-201ENST00000609881 752 ntBASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 MIR3687-1-201ENST00000614492 61 ntBASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 CDC14C-201ENST00000428251 1719 ntBASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NEUROD4Q9HD90 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 LINC02447-202ENST00000501888 2146 ntBASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 UPF3AP3-201ENST00000420996 769 ntBASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 AC093724.1-201ENST00000448659 1027 ntBASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 AC064836.3-201ENST00000607928 673 ntBASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 FAM197Y3-203ENST00000618346 717 ntBASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 AC104109.2-201ENST00000602919 1418 ntBASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.41■□□□□ 0.06
NEUROD4Q9HD90 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 AC069224.1-201ENST00000566372 1715 ntBASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms