Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 AL353801.3-201ENST00000609898 542 ntBASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 AC107918.4-201ENST00000641966 3141 ntBASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AC005622.1-201ENST00000636801 1703 ntBASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AC136759.1-202ENST00000530858 2194 ntBASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SLIRPQ9GZT3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 SLC22A20-204ENST00000530038 1673 ntBASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLIRPQ9GZT3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 LINC01230-201ENST00000625222 3017 ntBASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms