Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 AC099522.2-201ENST00000607001 744 ntBASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 AC105339.1-204ENST00000636249 355 ntBASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 AC078925.2-201ENST00000624013 1973 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 AC004461.1-201ENST00000412461 403 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 TFAMP1-201ENST00000412727 736 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 HLA-J-202ENST00000469281 1241 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 RN7SL589P-201ENST00000481268 310 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 RARRES2P8-201ENST00000566335 367 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 CYP2A7P1-201ENST00000595391 815 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 AC022145.2-201ENST00000598203 171 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 AL513210.1-201ENST00000629608 234 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 AL139011.1-202ENST00000642063 584 ntBASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PCGF1Q9BSM1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms