Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RPS8P6-201ENST00000426177 609 ntBASIC15.2■□□□□ 0.02
TM9SF2Q99805 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 ACTG1P14-201ENST00000446382 1122 ntBASIC15.2■□□□□ 0.02
TM9SF2Q99805 AC092183.1-201ENST00000469884 875 ntBASIC15.2■□□□□ 0.02
TM9SF2Q99805 YBX1P5-201ENST00000509441 847 ntBASIC15.2■□□□□ 0.02
TM9SF2Q99805 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF2Q99805 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF2Q99805 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF2Q99805 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF2Q99805 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF2Q99805 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF2Q99805 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF2Q99805 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TM9SF2Q99805 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 FRMD8P1-201ENST00000440433 1524 ntBASIC15.19■□□□□ 0.02
TM9SF2Q99805 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 AP006288.1-201ENST00000446065 395 ntBASIC15.19■□□□□ 0.02
TM9SF2Q99805 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 AP001160.2-201ENST00000596071 487 ntBASIC15.19■□□□□ 0.02
TM9SF2Q99805 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TM9SF2Q99805 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TM9SF2Q99805 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 SLC25A6P2-201ENST00000497974 877 ntBASIC15.18■□□□□ 0.02
TM9SF2Q99805 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 MIR4469-201ENST00000583919 79 ntBASIC15.18■□□□□ 0.02
TM9SF2Q99805 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TM9SF2Q99805 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TM9SF2Q99805 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms