Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL13Q99616 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 AL589702.1-201ENST00000641229 1509 ntBASIC13.66□□□□□ -0.22
CCL13Q99616 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CCL13Q99616 MIR346-201ENST00000362234 95 ntBASIC13.66□□□□□ -0.22
CCL13Q99616 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.66□□□□□ -0.22
CCL13Q99616 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 FAM58DP-201ENST00000428076 619 ntBASIC13.66□□□□□ -0.22
CCL13Q99616 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL13Q99616 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL13Q99616 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL13Q99616 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
CCL13Q99616 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.66□□□□□ -0.22
CCL13Q99616 AP001160.2-201ENST00000596071 487 ntBASIC13.66□□□□□ -0.22
CCL13Q99616 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL13Q99616 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL13Q99616 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL13Q99616 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL13Q99616 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 FOXO1B-201ENST00000504678 1527 ntBASIC13.65□□□□□ -0.22
CCL13Q99616 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.65□□□□□ -0.22
CCL13Q99616 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 AC142381.1-201ENST00000426099 345 ntBASIC13.65□□□□□ -0.22
CCL13Q99616 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms