Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.41■□□□□ 0.22
NDNQ99608 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NDNQ99608 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 TPM4P1-201ENST00000436100 807 ntBASIC16.41■□□□□ 0.22
NDNQ99608 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.41■□□□□ 0.22
NDNQ99608 POU5F1P6-201ENST00000466990 990 ntBASIC16.41■□□□□ 0.22
NDNQ99608 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.41■□□□□ 0.22
NDNQ99608 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.41■□□□□ 0.22
NDNQ99608 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NDNQ99608 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.41■□□□□ 0.22
NDNQ99608 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 AC020765.3-201ENST00000613051 740 ntBASIC16.41■□□□□ 0.22
NDNQ99608 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.41■□□□□ 0.22
NDNQ99608 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.41■□□□□ 0.22
NDNQ99608 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.41■□□□□ 0.22
NDNQ99608 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.41■□□□□ 0.22
NDNQ99608 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
NDNQ99608 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.41■□□□□ 0.22
NDNQ99608 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 AL365203.3-201ENST00000609742 2057 ntBASIC16.41■□□□□ 0.22
NDNQ99608 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.41■□□□□ 0.22
NDNQ99608 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NDNQ99608 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDNQ99608 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NDNQ99608 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
NDNQ99608 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.4■□□□□ 0.22
NDNQ99608 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NDNQ99608 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
NDNQ99608 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NDNQ99608 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.4■□□□□ 0.22
NDNQ99608 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.4■□□□□ 0.22
NDNQ99608 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 AL031432.2-201ENST00000566714 459 ntBASIC16.4■□□□□ 0.22
NDNQ99608 AL928711.1-201ENST00000570165 459 ntBASIC16.4■□□□□ 0.22
NDNQ99608 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NDNQ99608 Z83851.2-201ENST00000609564 659 ntBASIC16.4■□□□□ 0.22
NDNQ99608 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.4■□□□□ 0.22
NDNQ99608 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.4■□□□□ 0.22
NDNQ99608 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.4■□□□□ 0.22
NDNQ99608 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
NDNQ99608 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NDNQ99608 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDNQ99608 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.4■□□□□ 0.22
NDNQ99608 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.4■□□□□ 0.22
NDNQ99608 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.4■□□□□ 0.22
NDNQ99608 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
NDNQ99608 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NDNQ99608 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.39■□□□□ 0.21
NDNQ99608 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.39■□□□□ 0.21
NDNQ99608 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.39■□□□□ 0.21
NDNQ99608 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.39■□□□□ 0.21
NDNQ99608 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 AL645728.2-201ENST00000641974 660 ntBASIC16.39■□□□□ 0.21
NDNQ99608 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms