Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC023511.2-201ENST00000618803 211 ntBASIC14.93□□□□□ -0.02
SNX18Q96RF0 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 ALOX12P2-203ENST00000570921 1945 ntBASIC14.93□□□□□ -0.02
SNX18Q96RF0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNX18Q96RF0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SNX18Q96RF0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 RPS15P9-201ENST00000494093 319 ntBASIC14.92□□□□□ -0.02
SNX18Q96RF0 SLC25A1P1-201ENST00000528351 927 ntBASIC14.92□□□□□ -0.02
SNX18Q96RF0 AC107918.2-201ENST00000530817 355 ntBASIC14.92□□□□□ -0.02
SNX18Q96RF0 AC087641.1-201ENST00000557561 1021 ntBASIC14.92□□□□□ -0.02
SNX18Q96RF0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 CYP2A7P1-201ENST00000595391 815 ntBASIC14.92□□□□□ -0.02
SNX18Q96RF0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 GGT4P-201ENST00000623672 1708 ntBASIC14.92□□□□□ -0.02
SNX18Q96RF0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.92□□□□□ -0.02
SNX18Q96RF0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 FLJ16779-201ENST00000612722 7638 ntBASIC14.92□□□□□ -0.02
SNX18Q96RF0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNX18Q96RF0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AC073621.1-201ENST00000392730 636 ntBASIC14.91□□□□□ -0.02
SNX18Q96RF0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 PMS2P1-201ENST00000431037 1228 ntBASIC14.91□□□□□ -0.02
SNX18Q96RF0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AC018712.1-201ENST00000455767 687 ntBASIC14.91□□□□□ -0.02
SNX18Q96RF0 POU5F1P6-201ENST00000466990 990 ntBASIC14.91□□□□□ -0.02
SNX18Q96RF0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AL049840.3-201ENST00000602669 611 ntBASIC14.91□□□□□ -0.02
SNX18Q96RF0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AC092364.2-201ENST00000596710 2692 ntBASIC14.91□□□□□ -0.02
SNX18Q96RF0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SNX18Q96RF0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNX18Q96RF0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.91□□□□□ -0.02
SNX18Q96RF0 AL031731.1-201ENST00000642131 2094 ntBASIC14.91□□□□□ -0.02
SNX18Q96RF0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms