Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 AL031055.1-201ENST00000606362 631 ntBASIC16.85■□□□□ 0.29
IFT43Q96FT9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.85■□□□□ 0.29
IFT43Q96FT9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
IFT43Q96FT9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 AL031731.1-201ENST00000642131 2094 ntBASIC16.84■□□□□ 0.29
IFT43Q96FT9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 RNU1-129P-201ENST00000384064 167 ntBASIC16.84■□□□□ 0.29
IFT43Q96FT9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 U1.21-201ENST00000580816 167 ntBASIC16.84■□□□□ 0.29
IFT43Q96FT9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 AC092902.6-201ENST00000641783 218 ntBASIC16.84■□□□□ 0.29
IFT43Q96FT9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
IFT43Q96FT9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFT43Q96FT9 AL662844.4-201ENST00000606367 2838 ntBASIC16.83■□□□□ 0.29
IFT43Q96FT9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
IFT43Q96FT9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IFT43Q96FT9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 PMS2P4-201ENST00000412466 1052 ntBASIC16.83■□□□□ 0.28
IFT43Q96FT9 AL645939.2-201ENST00000427340 991 ntBASIC16.83■□□□□ 0.28
IFT43Q96FT9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 AC112191.1-201ENST00000523689 701 ntBASIC16.83■□□□□ 0.28
IFT43Q96FT9 RFPL4AP1-201ENST00000530883 850 ntBASIC16.83■□□□□ 0.28
IFT43Q96FT9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 AC021097.1-201ENST00000607902 574 ntBASIC16.83■□□□□ 0.28
IFT43Q96FT9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 AL513210.1-201ENST00000629608 234 ntBASIC16.83■□□□□ 0.28
IFT43Q96FT9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms