Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ECHDC3Q96DC8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 AL596087.1-201ENST00000400979 1969 ntBASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 TSSK5P-201ENST00000423978 907 ntBASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 TEX28P1-201ENST00000613479 1221 ntBASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 TEX28P2-201ENST00000617764 1221 ntBASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 KRT8P12-202ENST00000472924 1397 ntBASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ECHDC3Q96DC8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 CYP2T1P-202ENST00000641596 2535 ntBASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 AC100757.3-201ENST00000622361 1406 ntBASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 MIR648-201ENST00000385046 94 ntBASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 AC004987.2-201ENST00000395959 1148 ntBASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 HAUS4P1-201ENST00000406739 1145 ntBASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 AC027369.6-201ENST00000525520 931 ntBASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 AL590560.3-201ENST00000623350 461 ntBASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ECHDC3Q96DC8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
ECHDC3Q96DC8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ECHDC3Q96DC8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.21■□□□□ 0.18
ECHDC3Q96DC8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ECHDC3Q96DC8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.2■□□□□ 0.18
ECHDC3Q96DC8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms