Protein–RNA interactions for Protein: Q969F1

GTF3C6, General transcription factor 3C polypeptide 6, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6Q969F1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GTF3C6Q969F1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 PMS2P7-201ENST00000506558 1336 ntBASIC19.04■□□□□ 0.64
GTF3C6Q969F1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 HAUS4P1-201ENST00000406739 1145 ntBASIC19.04■□□□□ 0.64
GTF3C6Q969F1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 RARRES2P8-201ENST00000566335 367 ntBASIC19.04■□□□□ 0.64
GTF3C6Q969F1 AL138918.1-201ENST00000568306 659 ntBASIC19.04■□□□□ 0.64
GTF3C6Q969F1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 AC073389.1-201ENST00000595595 795 ntBASIC19.04■□□□□ 0.64
GTF3C6Q969F1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GTF3C6Q969F1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 MIR4321-201ENST00000592276 80 ntBASIC19.03■□□□□ 0.64
GTF3C6Q969F1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 AC091812.2-201ENST00000619081 385 ntBASIC19.03■□□□□ 0.64
GTF3C6Q969F1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 FOXO1B-201ENST00000504678 1527 ntBASIC19.03■□□□□ 0.64
GTF3C6Q969F1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.03■□□□□ 0.64
GTF3C6Q969F1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.02■□□□□ 0.64
GTF3C6Q969F1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms