Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ERCC4Q92889 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC4Q92889 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ERCC4Q92889 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC4Q92889 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ERCC4Q92889 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ERCC4Q92889 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.54■□□□□ 0.56
ERCC4Q92889 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ERCC4Q92889 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC4Q92889 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC4Q92889 AC005412.3-201ENST00000580309 715 ntBASIC18.54■□□□□ 0.56
ERCC4Q92889 AL356488.2-201ENST00000602755 427 ntBASIC18.54■□□□□ 0.56
ERCC4Q92889 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ERCC4Q92889 GGTLC5P-201ENST00000617623 998 ntBASIC18.54■□□□□ 0.56
ERCC4Q92889 AC008735.5-201ENST00000623544 497 ntBASIC18.54■□□□□ 0.56
ERCC4Q92889 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC4Q92889 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC4Q92889 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC4Q92889 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.54■□□□□ 0.56
ERCC4Q92889 AC005622.1-201ENST00000636801 1703 ntBASIC18.54■□□□□ 0.56
ERCC4Q92889 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ERCC4Q92889 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC4Q92889 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC4Q92889 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ERCC4Q92889 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC4Q92889 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC4Q92889 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 AC129492.6-201ENST00000611383 1305 ntBASIC18.53■□□□□ 0.56
ERCC4Q92889 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ERCC4Q92889 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ERCC4Q92889 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.53■□□□□ 0.56
ERCC4Q92889 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.53■□□□□ 0.56
ERCC4Q92889 FAM197Y8-203ENST00000450145 560 ntBASIC18.53■□□□□ 0.56
ERCC4Q92889 AC108073.2-201ENST00000464002 357 ntBASIC18.53■□□□□ 0.56
ERCC4Q92889 POU5F1P6-201ENST00000466990 990 ntBASIC18.53■□□□□ 0.56
ERCC4Q92889 AC073648.2-201ENST00000510116 352 ntBASIC18.53■□□□□ 0.56
ERCC4Q92889 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC4Q92889 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.53■□□□□ 0.56
ERCC4Q92889 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.53■□□□□ 0.56
ERCC4Q92889 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC4Q92889 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ERCC4Q92889 LINC01711-201ENST00000598340 967 ntBASIC18.53■□□□□ 0.56
ERCC4Q92889 ACTL9-202ENST00000612068 1252 ntBASIC18.53■□□□□ 0.56
ERCC4Q92889 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.53■□□□□ 0.56
ERCC4Q92889 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.53■□□□□ 0.56
ERCC4Q92889 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ERCC4Q92889 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ERCC4Q92889 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC4Q92889 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ERCC4Q92889 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC4Q92889 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC4Q92889 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC4Q92889 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC4Q92889 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC4Q92889 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ERCC4Q92889 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ERCC4Q92889 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC4Q92889 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC4Q92889 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.52■□□□□ 0.56
ERCC4Q92889 AC018712.1-201ENST00000455767 687 ntBASIC18.52■□□□□ 0.56
ERCC4Q92889 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ERCC4Q92889 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC4Q92889 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC4Q92889 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.52■□□□□ 0.56
ERCC4Q92889 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.52■□□□□ 0.56
ERCC4Q92889 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ERCC4Q92889 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC4Q92889 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.52■□□□□ 0.56
ERCC4Q92889 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC4Q92889 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms