Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTN4IP1Q8WWV3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 SNX33P1-201ENST00000592116 1762 ntBASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AC073621.1-201ENST00000392730 636 ntBASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AP002469.2-201ENST00000531724 424 ntBASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AC105339.3-201ENST00000560043 636 ntBASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AC104692.2-201ENST00000603054 253 ntBASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 AL773604.1-201ENST00000617417 272 ntBASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 TOP3BP1-201ENST00000420768 1380 ntBASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.79□□□□□ -0.2
RTN4IP1Q8WWV3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 REXO1L8P-201ENST00000604378 1897 ntBASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 POU5F1P6-201ENST00000466990 990 ntBASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 RPS15P9-201ENST00000494093 319 ntBASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 AL356488.2-201ENST00000602755 427 ntBASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 AC148477.8-201ENST00000624298 468 ntBASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 AL161772.1-201ENST00000610494 4412 ntBASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTN4IP1Q8WWV3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms