Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 ZNF259P1-201ENST00000407656 1365 ntBASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 IL9RP2-201ENST00000423948 1312 ntBASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 AL590627.1-203ENST00000421194 1026 ntBASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 KRT18P34-201ENST00000488218 1270 ntBASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 AC109635.5-201ENST00000533593 962 ntBASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 AL121894.2-201ENST00000602977 491 ntBASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP1Q8TDR0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 AC022188.1-201ENST00000620960 1664 ntBASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAF3IP1Q8TDR0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms