Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AC092119.3-201ENST00000612618 583 ntBASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 AC138035.3-201ENST00000622706 2791 ntBASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFWD2Q8NHY2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 AC106881.1-201ENST00000605849 3329 ntBASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 AC233702.3-201ENST00000578656 1387 ntBASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 UPK3BP1-201ENST00000428678 509 ntBASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 AC096582.2-201ENST00000510860 516 ntBASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 TPSP2-201ENST00000561760 610 ntBASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 BNIP3P18-201ENST00000593976 575 ntBASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 Z69720.1-201ENST00000601483 472 ntBASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.17■□□□□ 0.18
RFWD2Q8NHY2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 AC023908.3-201ENST00000564211 3047 ntBASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 AC074051.2-201ENST00000565115 352 ntBASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 AC073592.4-201ENST00000623827 446 ntBASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.16■□□□□ 0.18
RFWD2Q8NHY2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms