Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LSMEM1Q8N8F7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 BCAR1-209ENST00000546196 1340 ntBASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 FAM45BP-202ENST00000592932 1624 ntBASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 FDX1P1-201ENST00000449115 551 ntBASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 KRT19P2-202ENST00000557173 1012 ntBASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 AL078644.1-201ENST00000609881 752 ntBASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LSMEM1Q8N8F7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 IL9RP2-201ENST00000423948 1312 ntBASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LSMEM1Q8N8F7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LSMEM1Q8N8F7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LSMEM1Q8N8F7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.96□□□□□ -0.02
LSMEM1Q8N8F7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LSMEM1Q8N8F7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.96□□□□□ -0.02
LSMEM1Q8N8F7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.95□□□□□ -0.02
LSMEM1Q8N8F7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.95□□□□□ -0.02
LSMEM1Q8N8F7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms