Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ELK2BP-201ENST00000415014 1224 ntBASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 NMU-205ENST00000511469 756 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 AC006504.4-201ENST00000592118 1568 ntBASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01561Q8N1V8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 FES-204ENST00000414248 2327 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 AC020658.6-201ENST00000623564 1870 ntBASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 SART3-203ENST00000546611 1184 ntBASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 MIR4515-201ENST00000584082 81 ntBASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 AC008608.2-201ENST00000606089 416 ntBASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 AC008667.4-201ENST00000607370 168 ntBASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 AC107918.4-202ENST00000641623 219 ntBASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 FAM45BP-202ENST00000592932 1624 ntBASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC01561Q8N1V8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01561Q8N1V8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms