Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 EEF1DP1-201ENST00000585891 896 ntBASIC22.12■■□□□ 1.13
XRN1Q8IZH2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 AC093813.1-201ENST00000605066 256 ntBASIC22.12■■□□□ 1.13
XRN1Q8IZH2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRN1Q8IZH2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 FXNP2-201ENST00000411625 547 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AC004898.1-201ENST00000451057 766 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 RPSAP36-202ENST00000494591 1261 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 HIST2H2BC-201ENST00000498492 580 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AC015967.2-201ENST00000624092 234 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AC005915.1-201ENST00000624912 2018 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AC006435.4-201ENST00000625037 234 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AL356737.1-201ENST00000634391 234 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 RNU1-114P-201ENST00000365297 166 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 MIR4741-201ENST00000579822 90 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AL450472.2-201ENST00000603663 1156 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AL096828.3-201ENST00000615354 462 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 AL133373.2-201ENST00000623187 2828 ntBASIC22.11■■□□□ 1.13
XRN1Q8IZH2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
XRN1Q8IZH2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 HSPB1P2-201ENST00000448722 546 ntBASIC22.1■■□□□ 1.13
XRN1Q8IZH2 PHKG1P2-201ENST00000457537 863 ntBASIC22.1■■□□□ 1.13
XRN1Q8IZH2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 ACR-203ENST00000529621 708 ntTSL 5 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 AC138028.6-201ENST00000616106 1482 ntBASIC22.1■■□□□ 1.13
XRN1Q8IZH2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
XRN1Q8IZH2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 GAPDHP40-201ENST00000505218 1006 ntBASIC22.09■■□□□ 1.13
XRN1Q8IZH2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
XRN1Q8IZH2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms