Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC079328.2-201ENST00000561241 3354 ntBASIC17.28■□□□□ 0.36
RNF135Q8IUD6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 AC106886.4-201ENST00000623557 2502 ntBASIC17.28■□□□□ 0.36
RNF135Q8IUD6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF135Q8IUD6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 NFIC-211ENST00000641145 8399 ntBASIC17.27■□□□□ 0.36
RNF135Q8IUD6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 TTTY23B-201ENST00000442790 549 ntBASIC17.27■□□□□ 0.36
RNF135Q8IUD6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 AC119751.2-201ENST00000504529 210 ntBASIC17.27■□□□□ 0.36
RNF135Q8IUD6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 COX11-210ENST00000639671 696 ntBASIC17.27■□□□□ 0.36
RNF135Q8IUD6 AC068587.10-201ENST00000641210 219 ntBASIC17.27■□□□□ 0.36
RNF135Q8IUD6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF135Q8IUD6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RNF135Q8IUD6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF135Q8IUD6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF135Q8IUD6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF135Q8IUD6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF135Q8IUD6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RNF135Q8IUD6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF135Q8IUD6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF135Q8IUD6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 SPDYE19P-201ENST00000338590 713 ntBASIC17.26■□□□□ 0.35
RNF135Q8IUD6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 MTND6P24-201ENST00000440466 518 ntBASIC17.26■□□□□ 0.35
RNF135Q8IUD6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 RN7SL837P-201ENST00000463010 287 ntBASIC17.26■□□□□ 0.35
RNF135Q8IUD6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 AP005482.1-201ENST00000563722 1273 ntBASIC17.26■□□□□ 0.35
RNF135Q8IUD6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
RNF135Q8IUD6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF135Q8IUD6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms