Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 WFDC1-204ENST00000613603 549 ntBASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 AL162274.1-201ENST00000617191 1098 ntBASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 AL033527.4-201ENST00000641026 673 ntBASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 CYP4F24P-201ENST00000586049 1580 ntBASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAI1Q7Z5J4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 CLK3P2-201ENST00000427566 1453 ntBASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 AL139010.1-201ENST00000454878 894 ntBASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 LINC01115-203ENST00000606068 577 ntBASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 ME2P1-201ENST00000426028 1970 ntBASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 MTHFR-217ENST00000641820 1569 ntBASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 KRT17P8-201ENST00000540749 863 ntBASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 MIR6069-201ENST00000620069 79 ntBASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAI1Q7Z5J4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.75□□□□□ -0.21
RAI1Q7Z5J4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms