Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 PMS2P7-201ENST00000506558 1336 ntBASIC18.35■□□□□ 0.53
SHC4Q6S5L8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.35■□□□□ 0.53
SHC4Q6S5L8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.35■□□□□ 0.53
SHC4Q6S5L8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.35■□□□□ 0.53
SHC4Q6S5L8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 ZNF259P1-201ENST00000407656 1365 ntBASIC18.34■□□□□ 0.53
SHC4Q6S5L8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 AC002056.1-201ENST00000395613 760 ntBASIC18.34■□□□□ 0.53
SHC4Q6S5L8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 AC120114.3-201ENST00000611923 658 ntBASIC18.34■□□□□ 0.53
SHC4Q6S5L8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHC4Q6S5L8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.33■□□□□ 0.53
SHC4Q6S5L8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC4Q6S5L8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHC4Q6S5L8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.33■□□□□ 0.53
SHC4Q6S5L8 AC092850.2-201ENST00000623821 2697 ntBASIC18.33■□□□□ 0.53
SHC4Q6S5L8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.33■□□□□ 0.53
SHC4Q6S5L8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHC4Q6S5L8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHC4Q6S5L8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 KRT18P3-201ENST00000451602 1288 ntBASIC18.33■□□□□ 0.52
SHC4Q6S5L8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 AC073389.1-201ENST00000595595 795 ntBASIC18.33■□□□□ 0.52
SHC4Q6S5L8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.33■□□□□ 0.52
SHC4Q6S5L8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms