Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 AC011447.5-201ENST00000616168 564 ntBASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RPGRIP1LQ68CZ1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 SOCS2P1-201ENST00000417727 557 ntBASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 MFF-223ENST00000524634 647 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 AC120045.2-201ENST00000567334 178 ntBASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RPGRIP1LQ68CZ1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
RPGRIP1LQ68CZ1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
RPGRIP1LQ68CZ1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 RNF165-205ENST00000588679 2904 ntBASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 AP001889.1-201ENST00000525414 633 ntBASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 AC068587.3-201ENST00000526613 355 ntBASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 AL049840.4-201ENST00000602422 811 ntBASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 AC093525.8-201ENST00000624099 1342 ntBASIC22.7■■□□□ 1.22
RPGRIP1LQ68CZ1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 KLF2P4-201ENST00000451959 1225 ntBASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 PTP4A1P2-201ENST00000546033 454 ntBASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRIP1LQ68CZ1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms