Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 SPDYE18-201ENST00000510091 1050 ntBASIC17.19■□□□□ 0.34
VARS2Q5ST30 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.19■□□□□ 0.34
VARS2Q5ST30 MIR6069-201ENST00000620069 79 ntBASIC17.19■□□□□ 0.34
VARS2Q5ST30 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 AC092171.3-201ENST00000610122 2651 ntBASIC17.19■□□□□ 0.34
VARS2Q5ST30 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 CYP4F24P-201ENST00000586049 1580 ntBASIC17.19■□□□□ 0.34
VARS2Q5ST30 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VARS2Q5ST30 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VARS2Q5ST30 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 AL592424.1-201ENST00000563624 1536 ntBASIC17.18■□□□□ 0.34
VARS2Q5ST30 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 AC114501.2-201ENST00000439631 535 ntBASIC17.18■□□□□ 0.34
VARS2Q5ST30 ATP5G2P4-201ENST00000442175 420 ntBASIC17.18■□□□□ 0.34
VARS2Q5ST30 RN7SL692P-201ENST00000464677 288 ntBASIC17.18■□□□□ 0.34
VARS2Q5ST30 SDHAP3-202ENST00000515467 728 ntBASIC17.18■□□□□ 0.34
VARS2Q5ST30 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 API5-211ENST00000534695 560 ntTSL 5 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 AL596325.1-201ENST00000563991 1082 ntBASIC17.18■□□□□ 0.34
VARS2Q5ST30 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VARS2Q5ST30 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.18■□□□□ 0.34
VARS2Q5ST30 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 SPDYE19P-201ENST00000338590 713 ntBASIC17.17■□□□□ 0.34
VARS2Q5ST30 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
VARS2Q5ST30 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VARS2Q5ST30 AL353779.1-201ENST00000434793 351 ntBASIC17.17■□□□□ 0.34
VARS2Q5ST30 DOC2GP-202ENST00000514950 1163 ntBASIC17.17■□□□□ 0.34
VARS2Q5ST30 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms