Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.59■□□□□ 0.41
CBWD3Q5JTY5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.59■□□□□ 0.41
CBWD3Q5JTY5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.59■□□□□ 0.41
CBWD3Q5JTY5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD3Q5JTY5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CBWD3Q5JTY5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.59■□□□□ 0.41
CBWD3Q5JTY5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD3Q5JTY5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBWD3Q5JTY5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
CBWD3Q5JTY5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 RPSAP43-201ENST00000402237 625 ntBASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 AC061975.2-201ENST00000581722 295 ntBASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 AC022145.2-201ENST00000598203 171 ntBASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 AC105339.1-204ENST00000636249 355 ntBASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBWD3Q5JTY5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.57■□□□□ 0.4
CBWD3Q5JTY5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 AC046158.3-201ENST00000624947 2558 ntBASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CBWD3Q5JTY5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms