Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.58■□□□□ 0.08
SPIN4Q56A73 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SPIN4Q56A73 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SPIN4Q56A73 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPIN4Q56A73 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.58■□□□□ 0.08
SPIN4Q56A73 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPIN4Q56A73 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SPIN4Q56A73 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPIN4Q56A73 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.58■□□□□ 0.08
SPIN4Q56A73 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.58■□□□□ 0.08
SPIN4Q56A73 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SPIN4Q56A73 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SPIN4Q56A73 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.58■□□□□ 0.08
SPIN4Q56A73 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AL596257.1-201ENST00000641463 2694 ntBASIC15.57■□□□□ 0.08
SPIN4Q56A73 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 HAUS4P1-201ENST00000406739 1145 ntBASIC15.57■□□□□ 0.08
SPIN4Q56A73 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AC106730.1-201ENST00000566722 1090 ntBASIC15.57■□□□□ 0.08
SPIN4Q56A73 AC002347.1-201ENST00000569543 541 ntBASIC15.57■□□□□ 0.08
SPIN4Q56A73 AP002472.1-201ENST00000577490 586 ntBASIC15.57■□□□□ 0.08
SPIN4Q56A73 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AC120114.3-201ENST00000611923 658 ntBASIC15.57■□□□□ 0.08
SPIN4Q56A73 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AC105917.1-201ENST00000506637 2539 ntBASIC15.57■□□□□ 0.08
SPIN4Q56A73 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AL589702.1-201ENST00000641229 1509 ntBASIC15.57■□□□□ 0.08
SPIN4Q56A73 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SPIN4Q56A73 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SPIN4Q56A73 AP005117.1-202ENST00000581724 1908 ntBASIC15.56■□□□□ 0.08
SPIN4Q56A73 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 KRT18P3-201ENST00000451602 1288 ntBASIC15.56■□□□□ 0.08
SPIN4Q56A73 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 AC008677.1-201ENST00000519230 1561 ntBASIC15.56■□□□□ 0.08
SPIN4Q56A73 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.56■□□□□ 0.08
SPIN4Q56A73 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SPIN4Q56A73 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPIN4Q56A73 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPIN4Q56A73 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms